Takes a bed12 file and converts to a GFF3 file
meta{:bash}
:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
bed{:bash}
:file
Input bed12 file
*.bed
gff{:bash}
Groovy Map containing sample information
*.gff{:bash}
Output GFF3 file
*.{gff}
versions{:bash}
versions.yml{:bash}
File containing software versions
versions.yml
AGAT is a toolkit for manipulation and getting information from GFF/GTF files
