Description

mkarv function of a corresponding ataqv tool

Input

name:type
description
pattern

jsons/*{:bash}

:file

JSON files

*.json

Output

name:type
description
pattern

html{:bash}

html{:bash}

:directory

Web application to visualize results in HTML format

*.html

versions{:bash}

versions.yml{:bash}

:file

File containing software versions

versions.yml

Tools

ataqv
GPL v3

ataqv is a toolkit for measuring and comparing ATAC-seq results. It was written to help understand how well ATAC-seq assays have worked, and to make it easier to spot differences that might be caused by library prep or sequencing.