modules/custom_dumpsoftwareversions

Custom module used to dump software versions within the nf-core pipeline template

customdumpversion

https://github.com/nf-core/modules/[...]/modules/nf-core/custom/dumpsoftwareversions

Description

Custom module used to dump software versions within the nf-core pipeline template

Input

name:type

description

pattern

`versions{:bash}`
`:file`

YML file containing software versions

*.yml

Output

name:type

description

pattern

`yml{:bash}`

`software_versions.yml{:bash}`
`:file`

Standard YML file containing software versions

software_versions.yml

`mqc_yml{:bash}`

`software_versions_mqc.yml{:bash}`
`:file`

MultiQC custom content YML file containing software versions

software_versions_mqc.yml

`versions{:bash}`

`versions.yml{:bash}`
`:file`

File containing software versions

versions.yml

Tools

custom
MIT

Custom module used to dump software versions within the nf-core pipeline template

github.com/nf-core/tools

modules/custom_dumpsoftwareversions

Description

Input

`versions{:bash}`
`:file`

Output

`yml{:bash}`

`software_versions.yml{:bash}`
`:file`

`mqc_yml{:bash}`

`software_versions_mqc.yml{:bash}`
`:file`

`versions{:bash}`

`versions.yml{:bash}`
`:file`

Tools

custom
MIT

included in

maintainers

get in touch

modules/custom_dumpsoftwareversions

Description

Input

versions{:bash}:file

Output

yml{:bash}

software_versions.yml{:bash}:file

mqc_yml{:bash}

software_versions_mqc.yml{:bash}:file

versions{:bash}

versions.yml{:bash}:file

Tools

custom MIT

included in

maintainers

get in touch

`versions{:bash}`
`:file`

`yml{:bash}`

`software_versions.yml{:bash}`
`:file`

`mqc_yml{:bash}`

`software_versions_mqc.yml{:bash}`
`:file`

`versions{:bash}`

`versions.yml{:bash}`
`:file`

custom
MIT