Description

Sorts sequences by id/name/sequence/length

Input

name:type
description
pattern

meta{:bash}

:map

Groovy Map containing sample information e.g. [ id:'sample1' ]

fastx{:bash}

:file

Input fasta/fastq file

*.{fsa,fas,fa,fasta,fastq,fq,fsa.gz,fas.gz,fa.gz,fasta.gz,fastq.gz,fq.gz}

Output

name:type
description
pattern

fastx{:bash}

meta{:bash}

:map

Groovy Map containing sample information e.g. [ id:'sample1' ]

${prefix}.*{:bash}

:file

Output fasta/fastq file

*.{fasta.gz,fastq.gz}

versions{:bash}

versions.yml{:bash}

:file

File containing software versions

versions.yml