nf-core/sarek

Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing

annotationcancergatk4genomicsgermlinepre-processingsomatictarget-panelsvariant-callingwhole-exome-sequencingwhole-genome-sequencing

Launch version 3.5.1 https://github.com/nf-core/sarek

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execution_report_2025-03-24_10-10-28.html

6 months 3.66 MB

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execution_report_2025-03-24_15-45-05.html

6 months 3.73 MB

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execution_trace_2025-03-24_10-10-28.txt

6 months 45.5 kB

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execution_trace_2025-03-24_15-45-05.txt

6 months 47.9 kB

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manifest_2025-03-24_15-45-05.bco.json

6 months 484 kB

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nf_core_sarek_software_mqc_versions.yml

6 months 1.97 kB

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params_2025-03-24_10-11-06.json

6 months 32.6 kB

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params_2025-03-24_15-45-35.json

6 months 32.6 kB

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pipeline_dag_2025-03-24_10-10-28.html

6 months 38.9 kB

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pipeline_dag_2025-03-24_15-45-05.html

6 months 38.9 kB

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